Hyun Jung Park, G. Jin, and L. Nakhleh, "Algorithmic strategies for estimating the amount of reticulation from a collection of gene trees.", Proceedings of the 9th Annual International Conference on Computational Systems Biology. To appear, 2010 [PDF]
Hyun Jung Park, G. Jin, and L. Nakhleh, "Bootstrap-based Support of HGT Inferred by Maximum Parsimony.", BMC Evolutionary Biology, 10: 131, 2010[PDF]
Hyun Jung Park, Seung-Jin Sul, Tiffani L. Williams, "Large-Scale Analysis of Phylogenetic Search Behavior,"book chapter, Advances in Computational Biology, to appear [PDF]
2009
Hyun Jung Park, Tiffani L. Williams, "A Fitness Distance Correlation Measure for Evolutionary Trees," 1st Intl. Conference on Bioinformatics and Computational Biology (BiCoB ’09)[PDF]
In preparation
Hyun Jung Park, and L. Nakhleh, "On the Performance of the Akaike and Bayesian Information Criteria for Phylogenetic Network Selection", In preparation
Hyun Jung Park, and L. Nakhleh, "From Multiple Gene Trees to a Phylogenetic Network via Pairwise Reconciliations", In preparation
C-H. Shih, S. Li, Hyun Jung Park, L. Nakhleh, and M.H. Kohn, "Gene-gene network interactions as predictors of intra-chromosomal linkage disequilibrium in the human haplotype map." In preparation